Sliding Windows
The Sliding Windows application allows the user to watch the progress of the sliding windows algorithm as it process a user-defined nucleotide sequence.
Dishonest Casino
The Dishonest Casino application allows the user to specify the parameters to a hidden Markov model to solve the Dishonest Casino problem, in which a fair and unfair die are used with specified probabilities.
CpG Islands
The CpG Islands application allows the user to specify the parameters to a hidden Markov model to solve the task of finding CpG islands in nucleotide sequences.